Skip to main content

Table 3 Primers used for ChIP

From: The methyl binding domain 3/nucleosome remodelling and deacetylase complex regulates neural cell fate determination and terminal differentiation in the cerebral cortex

Primer name

Sequence (5′ to 3′)

Nhlh1 -455 F

AGGGAGGACCTTCAGGTTAC

Nhlh1 -455R

TTTCATTCTGAGTCCCAGCG

Nhlh1 -298 F

TGCTACCTCTAGTGTGGGAG

Nhlh1 -298R

AATAGAGAGCTGGGGAAGGG

Nhlh1 145 F

CCCTTTTGCCTAGGCCTTAC

Nhlh1 145R

CTCAAGGGTCATCTGTCTGC

Nhlh1 314 F

GACAGATGACCCTTGAGCAG

Nhlh1 314R

ATGCTGCCCAAAGAATCCAA

Nhlh1 871 F

ACATGGATGGGAAATGCTCC

Nhlh1 871R

CACCAGCATCTGACACCTAC

Nhlh1 1522 F

GAGGCTGAGGGATTGTGAAG

Nhlh1 1522R

CCTTCTGCACCCTTGTTTCT

Nhlh1 2906 F

TGTCTCGAAGGACTTCACCT

Nhlh1 2906R

AGCCGAACTTGGCTTCATAG

Nhlh1 3683 F

CTCCTACCTGAACCATGTGC

Nhlh1 3683R

AGGGAAATGGGGAGAATCCA

Nhlh2 -4520 F

CGATGCCTCAACACATACCA

Nhlh2 -4520R

TACCCACTCACAGACACACT

Nhlh2 -824 F

TTTGGGACTGGAGGTCATCT

Nhlh2 -824R

CCCATCCTAACACGTGAGTG

Nhlh2 418 F

AGAGGCAACCTTAAGCCCTA

Nhlh2 418R

GGGACGATTCCTCCACTTTC

Nhlh2 2907 F

GAGCTCCGCAAACTACTACC

Nhlh2 2907R

TCAAGTGTCTCTGGGCAAAC

Nhlh2 4798 F

CCAGCCTGGGATGGTATAGA

Nhlh2 4798R

CTCCTTAGCCCCGAGTTTTC

NeuroD1 -1150 F

AACCATTCCTCCTCCTCCTC

NeuroD1 -1150R

CTGTTTCCCTTTCTGGGGAC

NeuroD1 -619 F

AAGGTTGAGTCAAGGCTGTG

NeuroD1 -619R

GGTGGCTGGCTTCTAATCTC

NeuroD1 -338 F

AAGCAGTCTTCAGGCTAGGA

NeuroD1 -338R

ATTAACCCTTTGTGGCAGCA

NeuroD1 328 F

ATTTGTGGAGTCGGTTGTCC

NeuroD1 328R

GAGTGCTGGGACTCATTACG

NeuroD1 830 F

TGCTACCTGTTACTGTCCCA

NeuroD1 830R

GGCTTTTCAAAGTTCGCCTC

NeuroD1 1450 F

GTGAGTTGGGAGTGACTTGG

NeuroD1 1450R

GTCCACTGCAAAATGGATGC

NeuroD1 2258 F

AATAGAGACACTGCGCTTGG

NeuroD1 2258R

CAGGGGACTGGTAGGAGTAG

NeuroD1 2658 F

TGCCTTTACCATGCACTACC

NeuroD1 2658R

GTTGTCTATGGGGATCTCGC

NeuroD1 4271 F

AGCTTGTCCTGTGCTTAGTC

NeuroD1 4271R

TAAAACAGAGGCGAGGTCTG

NeuroD2 -1838 F

GACTTCCTAGTTGCAGAGCC

NeuroD2 -1838R

GAAAGAAGGTCCAAAGGCCA

NeuroD2 -450 F

GGTGCCAGCATCTACCTATG

NeuroD2 -450R

CATTTCCCTGTCTCCAGGTC

NeuroD2 428 F

CCGTGTTCTCTCTCCCATTG

NeuroD2 428R

GTGGGAAAAGGTCACAGGTT

NeuroD2 1388 F

CACTCTGTGCTGTCTGTCTC

NeuroD2 1388R

GGATCTCTTCTCCTCCACGA

NeuroD2 3082 F

CACCCTAACACGAATCTCCG

NeuroD2 3082R

ATGCGTTTTCTCTCCGATCC