Table 4 Manual search for genes associated with axonal regeneration processes show that they are differentially expressed in regenerative and non-regenerative stages
Category | GenBank ID | Gene name | UniGene cluster description | log2FC | |||||
|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | R1 | R2 | R6 | NR1 | NR2 | NR6 |
Axonal guidance | BC108561 | ngfr | Nerve growth factor receptor | 0.21 | -0.20 | -0.31 | -0.16 | -0.05 | 1.20 |
| Â | X91191 | epha4-a | EPH receptor A4 | -0.25 | -0.09 | 0.25 | -0.42 | -0.48 | -1.36 |
| Â | BC043626 | epha4-b | EPH receptor A4 | -0.17 | 0.13 | 0.52 | -0.51 | -0.16 | -1.28 |
| Â | BC060745 | epha2 | EPH receptor A2 | -0.42 | 0.01 | -0.01 | 0.07 | 1.01 | 1.46 |
| Â | BC077964 | sema4b | Sema domain, immunoglobulin domain (Ig), transmembrane domain and short cytoplasmic domain, (semaphorin) 4B | -0.35 | -0.01 | 0.19 | 0.08 | 0.43 | -1.00 |
| Â | BC124869 | sema3f | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Â F | 0.19 | 0.30 | 0.18 | 0.29 | 1.15 | 1.64 |
| Â | AF427525 | reln | Reelin | -0.30 | 0.21 | 0.32 | -0.52 | 0.26 | -1.16 |
Intrinsic factors | AY116304 | klf15 | Krüppel-like factor 15 | -1.49 | -0.58 | -0.43 | -0.46 | 0.64 | -0.84 |
|  | BC092147 | klf10 | Krüppel-like factor 10 | -0.18 | -0.10 | -0.05 | 0.28 | 0.74 | 1.72 |
| Â | BC054214 | socs3 | Suppressor of cytokine signaling 3 | 2.12 | 2.00 | 1.72 | 2.15 | 3.72 | 4.62 |
| Â | BC068752 | socs3 | Suppressor of cytokine signaling 3 | 3.31 | 2.05 | 1.01 | 3.40 | 4.45 | 6.55 |
| Â | BC044717 | stat3.2 | Signal transducer and activator of transcription 3 (acute-phase response factor), gene 2 | 0.74 | 0.61 | 0.19 | 0.55 | 0.98 | 2.10 |
| Â | BC086272 | stat6 | Signal transducer and activator of transcription 6, interleukin-4 induced | -0.43 | 0.72 | 0.47 | 0.38 | 0.57 | 1.62 |